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⇤ ← Revision 1 as of 2009-10-19 09:59:17 →
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Editor: MatthiasTreder
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== Howto get started with our toolbox == = Documentation of the BBCI Matlab Toolbox =
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To checkout the BBCI SVN please do the following: ------
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mkdir ~/svn
cd ~/svn
svn checkout --username UserName
https://ml01.zrz.tu-berlin.de/svn/ida/public/bbci ida/public/bbci
svn checkout --username UserName
https://ml01.zrz.tu-berlin.de/svn/ida/public/ml ida/public/ml		 '''IN CONSTRUCTION'''
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svn checkout --username UserName https://ml01.zrz.tu-berlin.de/svn/ida/public/bbci_tex bbci_tex ----
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To load the new version of the toolbox in Matlab do:
cd('~/svn/ida/public/bbci/toolbox/startup');
startup_bbci;		 == Contents ==
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You should include those lines in your local startup.m and replace the old
startup_bci.		  * /ToolboxSetup - ''Installation, configuration and starting the toolbox''
 * /ToolboxData - ''Data formats, data structures, functions for fileio''
 * /ToolboxIntro - ''A gentle introduction to the toolbox''
 * /ToolboxPracticalExamples - ''Of investigating ERPs, and Spectral Analysis''
 * /ToolboxFileio - ''Functions for reading and writing EEG data''
 * /ToolboxVisualization - ''How to visualize EEG data''
 * /ToolboxClassification - ''How to use classifiers and tools for validation''
 * /ToolboxAutomation - ''Automatic analysis of a set of experiments, and generation of PDFs'' (includes calculation of Grand Average ERPs)
 * /ToolboxExperimentalStudy - ''Preparing scripts for an experimental study (acquisition and data conversion)''
 * /ToolboxOnline - All about the online system
 * Function reference: Basti please add the link here!

== Advanced topics ==
==== Preprocessing ====
 * /ToolboxFilter - ''Filter design [TODO]''

==== Neurophysiology ====
 * /ToolboxTimeFrequency - ''Time-frequency analysis using wavelets and short-time Fourier transform [in progress]''
 * /ToolboxSource - ''EEG source localization [TODO]'' Stefan?
 * /ToolboxCoherence - ''Coherence and phase locking* [TODO]'' Arne??? Johannes?

==== Machine Learning ====
 * /ToolboxClassifier - ''Classifier selection (linear vs non-linear etc)'' Volunteers???
 * /ToolboxPca - ''Principal components analysis (PCA) [TODO]'' Sven?
 * /ToolboxIca - ''Independent components analysis (ICA) [TODO]'' Michael?
 * /ToolboxCsp - ''Common Spatial Patterns (CSP), CSP patches, stationary CSP [TODO]'' Carmen? Claudia? Wojtek?
 * /ToolboxSsa - ''Stationary Subspace Analysis (SSA) [TODO]'' Paul???
 * /ToolboxCca - ''Canonical Correlation Analysis (CCA) [TODO]'' ???
==== Statistics & Math ====
 * /ToolboxStatisticalAnalysis - ''Using parametric (t-test, ANOVA) and nonparametric tests''


*Depending on permission to include Guido's code into the BBCI toolbox.

You can use the ''/ToolboxAdvancedTopicsTemplate'' to start off writing your tutorial.

Documentation of the BBCI Matlab Toolbox

IN CONSTRUCTION

Contents

Advanced topics

Preprocessing

Neurophysiology

Machine Learning

  • /ToolboxClassifier - Classifier selection (linear vs non-linear etc) Volunteers???

  • /ToolboxPca - Principal components analysis (PCA) [TODO] Sven?

  • /ToolboxIca - Independent components analysis (ICA) [TODO] Michael?

  • /ToolboxCsp - Common Spatial Patterns (CSP), CSP patches, stationary CSP [TODO] Carmen? Claudia? Wojtek?

  • /ToolboxSsa - Stationary Subspace Analysis (SSA) [TODO] Paul???

  • /ToolboxCca - Canonical Correlation Analysis (CCA) [TODO] ???

Statistics & Math

*Depending on permission to include Guido's code into the BBCI toolbox.

You can use the /ToolboxAdvancedTopicsTemplate to start off writing your tutorial.

IDA Wiki: IDA/BerlinBCI/ToolBox (last edited 2011-12-13 13:42:17 by MatthiasTreder)